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  "Title": "Gillespie's Stochastic Simulation Algorithm (SSA)",
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  "Description": "Provides a simple to use, intuitive, and extensible\ninterface to several stochastic simulation algorithms for\ngenerating simulated trajectories of finite population\ncontinuous-time model. Currently it implements Gillespie's\nexact stochastic simulation algorithm (Direct method) and\nseveral approximate methods (Explicit tau-leap, Binomial\ntau-leap, and Optimized tau-leap). The package also contains a\nlibrary of template models that can be run as demo models and\ncan easily be customized and extended. Currently the following\nmodels are included, 'Decaying-Dimerization' reaction set,\nlinear chain system, logistic growth model, 'Lotka'\npredator-prey model, Rosenzweig-MacArthur predator-prey model,\n'Kermack-McKendrick' SIR model, and a 'metapopulation' SIRS\nmodel. Pineda-Krch et al. (2008) <doi:10.18637/jss.v025.i12>.",
  "Authors@R": "c(\nperson(\"Mario\", \"Pineda-Krch\", role = c(\"aut\")),\nperson(\n\"Robrecht\", \"Cannoodt\",\nemail = \"rcannood@gmail.com\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0003-3641-729X\")\n)\n)",
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  "Date/Publication": "2022-03-10 08:37:50 UTC",
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  "_realowner": "rcannood",
  "_cranurl": true,
  "_releases": [
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      "date": "2007-09-21"
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      "date": "2007-10-04"
    },
    {
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      "date": "2007-10-14"
    },
    {
      "version": "0.5-0",
      "date": "2007-10-20"
    },
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    "ssa.etl",
    "ssa.otl",
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    {
      "page": "GillespieSSA-package",
      "title": "Gillespie Stochastic Simulation Algorithm package",
      "concept": [
        "Binomial tau-leap method",
        "Direct method",
        "Explicit tau-leap method",
        "Gillespie",
        "Optimized tau-leap method",
        "Poisson",
        "biology",
        "ecology",
        "epidemiology",
        "evolution",
        "stochastic simulation algorithm"
      ],
      "topics": [
        "GillespieSSA-package",
        "GillespieSSA"
      ]
    },
    {
      "page": "ssa",
      "title": "Invoking the stochastic simulation algorithm",
      "topics": [
        "ssa"
      ]
    },
    {
      "page": "ssa.btl",
      "title": "Binomial tau-leap method (BTL)",
      "topics": [
        "ssa.btl"
      ]
    },
    {
      "page": "ssa.d",
      "title": "Direct method (D)",
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        "ssa.d"
      ]
    },
    {
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      "title": "Explicit tau-leap method (ETL)",
      "topics": [
        "ssa.etl"
      ]
    },
    {
      "page": "ssa.otl",
      "title": "Optimized tau-leap method (OTL)",
      "topics": [
        "ssa.otl"
      ]
    },
    {
      "page": "ssa.plot",
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      "topics": [
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