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  "Title": "Running Commands Remotely on 'Gridengine' Clusters",
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  "Description": "Run lapply() calls in parallel by submitting them to\n'gridengine' clusters using the 'qsub' command.",
  "URL": "https://github.com/rcannood/qsub",
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  "Encoding": "UTF-8",
  "License": "GPL-3",
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  "Repository": "https://rcannood.r-universe.dev",
  "Date/Publication": "2021-09-23 09:28:39 UTC",
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    "cp_remote",
    "create_qsub_config",
    "file_exists_remote",
    "get_default_qsub_config",
    "is_job_running",
    "is_qsub_config",
    "ls_remote",
    "mkdir_remote",
    "override_qsub_config",
    "qacct",
    "qacct_remote",
    "qstat_j",
    "qstat_j_remote",
    "qstat_remote",
    "qsub_lapply",
    "qsub_retrieve",
    "qsub_run",
    "rm_remote",
    "rsync_remote",
    "run_remote",
    "set_default_qsub_config",
    "test_qsub_config",
    "write_remote"
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    {
      "page": "cat_remote",
      "title": "Read from a file remotely",
      "topics": [
        "cat_remote"
      ]
    },
    {
      "page": "cp_remote",
      "title": "A wrapper around the scp shell command that handles local/remote files and allows copying between remote hosts via the local machine.",
      "topics": [
        "cp_remote"
      ]
    },
    {
      "page": "create_qsub_config",
      "title": "Create a qsub configuration object.",
      "topics": [
        "create_qsub_config",
        "override_qsub_config"
      ]
    },
    {
      "page": "create_ssh_connection",
      "title": "Create an SSH connection with remote",
      "topics": [
        "create_ssh_connection"
      ]
    },
    {
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      "title": "Checks if a local or remote file exists.",
      "topics": [
        "file_exists_remote"
      ]
    },
    {
      "page": "get_default_qsub_config",
      "title": "Retrieve a default qsub_config.",
      "topics": [
        "get_default_qsub_config"
      ]
    },
    {
      "page": "instantiate_qsub_config",
      "title": "Create an instance of the qsub_config.",
      "topics": [
        "instantiate_qsub_config"
      ]
    },
    {
      "page": "is_job_running",
      "title": "Check whether a job is running.",
      "topics": [
        "is_job_running"
      ]
    },
    {
      "page": "is_qsub_config",
      "title": "Returns whether the passed object is a qsub_config object.",
      "topics": [
        "is_qsub_config"
      ]
    },
    {
      "page": "is_remote_local",
      "title": "Tests whether the remote is a local host or not.",
      "topics": [
        "is_remote_local"
      ]
    },
    {
      "page": "ls_remote",
      "title": "View the contents of a directory remotely",
      "topics": [
        "ls_remote"
      ]
    },
    {
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      "title": "Creates a remote directory with the specified group ownership and permissions.",
      "topics": [
        "mkdir_remote"
      ]
    },
    {
      "page": "qacct",
      "title": "Run qacct on remote",
      "topics": [
        "qacct"
      ]
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      "page": "qacct_remote",
      "title": "Run qacct on remote",
      "topics": [
        "qacct_remote"
      ]
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        "qstat_j"
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        "qstat_j_remote"
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      "topics": [
        "qstat_remote"
      ]
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    {
      "page": "qsub",
      "title": "Running Commands Remotely on Gridengine Clusters",
      "topics": [
        "qsub"
      ]
    },
    {
      "page": "qsub_lapply",
      "title": "Apply a Function over a List or Vector on a gridengine system!",
      "topics": [
        "qsub_lapply"
      ]
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