Package: diffusionMap 1.2.0
diffusionMap: Diffusion Map
Implements diffusion map method of data parametrization, including creation and visualization of diffusion map, clustering with diffusion K-means and regression using adaptive regression model. Richards (2009) <doi:10.1088/0004-637X/691/1/32>.
Authors:
diffusionMap_1.2.0.tar.gz
diffusionMap_1.2.0.zip(r-4.5)diffusionMap_1.2.0.zip(r-4.4)diffusionMap_1.2.0.zip(r-4.3)
diffusionMap_1.2.0.tgz(r-4.4-any)diffusionMap_1.2.0.tgz(r-4.3-any)
diffusionMap_1.2.0.tar.gz(r-4.5-noble)diffusionMap_1.2.0.tar.gz(r-4.4-noble)
diffusionMap_1.2.0.tgz(r-4.4-emscripten)diffusionMap_1.2.0.tgz(r-4.3-emscripten)
diffusionMap.pdf |diffusionMap.html✨
diffusionMap/json (API)
| # Install 'diffusionMap' in R: |
| install.packages('diffusionMap', repos = c('https://rcannood.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/rcannood/diffusionmap/issues
Last updated 5 years agofrom:5ed21f8c4b. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Aug 24 2024 |
| R-4.5-win | OK | Aug 24 2024 |
| R-4.5-linux | OK | Aug 24 2024 |
| R-4.4-win | OK | Aug 24 2024 |
| R-4.4-mac | OK | Aug 24 2024 |
| R-4.3-win | OK | Aug 24 2024 |
| R-4.3-mac | OK | Aug 24 2024 |
Exports:adapregadapreg.mdiffusediffusionKmeansdistortionMinepsilonComputenystrom
Dependencies:clicpp11glueigraphlatticelifecyclemagrittrMatrixpkgconfigrlangscatterplot3dvctrs
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Adaptive Regression | adapreg |
| Adaptive Regression | adapreg.m |
| Annulus toy data set | annulus |
| Chainlink toy clustering data set | Chainlink |
| Compute diffusion map coordinates from pair-wise distances. | diffuse |
| Diffusion K-means | diffusionKmeans |
| Distortion Minimization via K-means | distortionMin |
| Compute default diffusion map epsilon. | epsilonCompute |
| Perform Nystrom Extension to estimate diffusion coordinates of data. | nystrom |
